Import your raw or working datasets for processing or further analysis. Compatible with already-processed data from Seurat (.rds) or scanpy (.h5ad), or upload raw aligned data directly from CellRanger (10x) and STARsolo/Kallisto pipelines.
Turn raw counts into analyzable data with reproducibility built right into the dataset itself. Pre-built pipelines for simplicity and speed, fully customizable when you need flexibility.
Correct for technical artifacts between samples with Harmony, with diagnostics that say whether integration was needed, how well batches mixed, and when the task is beyond simple batch correction.
Pull novel datasets out of existing atlases. Re-cluster and re-analyze in minutes to pull new insight from old data.
Identify cell-type markers to label UMAP clusters, or run pseudobulk differential expression (DESeq2) between conditions.
Manage your cell metadata: group, derive, rename and repair columns. Changes are written to your dataset and visible to all downstream processing and analysis.
